Oct 16, 2019.
1) – Download and Install ImageJ Software 1
ImageJ is in the public domain. It can be freely downloaded and installed on any computer including those at schools, homes, and businesses.
Go to the ImageJ Download page , and download and install the application for your operating system.
- Click the ImageJ Download page and it will open in a new window. Click the link that appears directly below the name of your computer's operating system (e.g. Mac, Linux, Windows). This action will transfer a compressed file of the software to your computer. Your browser should automatically expand the file, creating an ImageJ folder on your computer's hard drive.
For more detailed instructions from the ImageJ website, click Installation Instructions then select your operating system.
2) – Update or Downgrade ImageJ 1
Double-click the ImageJ icon to launch the application and choose Help > Update > ImageJ.... A window will appear, telling you the version you are currently running and a list of upgrade versions. Choose the version you want to upgrade to (usually the most recent, or default version) and click OK. After the update downloads, you will need to re-launch ImageJ to run the new version.
ImageJ is a professional research and analysis tool, and is under constant development. If the latest update of the application introduces new bugs or errors, or has an unfamiliar interface that does not match written instructions, you can downgrade your copy of ImageJ to an older, more stable or familiar version.
Source
1Adapted from Earth Exploration Toolbook chapter instructions under Creative Commons license Attribution-NonCommercial-ShareAlike 1.0.2Adapted from Eyes in the Sky II online course materials, Copyright 2010, TERC. All rights reserved.
3New material developed for Earth Analysis Techniques, Copyright 2011, TERC. All rights reserved.
ZEN
For a free copy of ZEN lite image processing software, click here: ZEN lite (Windows only). The HCBI recommends frequent downloads of ZEN to ensure your software is up-to-date and compatible with files from our newest microscopes
Imagej Software Fiji
Click here to download the ZEN Blue Image analysis guide.
Fiji/ImageJ
For a free copy of Fiji (ImageJ) image processing software, click here: Fiji (Windows or Mac)
Click here to be redirected to the extensive Fiji online documentation
Click here for a link to the ImageJ 1 documentation
Lightsheet .CZI to .TIF converter
The .czi to .tif converter for Lightsheet files is implemented as a Fiji/ImageJ macro. Click here for download, installation and help documents for timelapse/multiview files, and here for tiled files.
AxioScan .CZI to .TIF converter
The .czi to .tif converter for Axioscan files is implemented as a Fiji/ImageJ macro. Click here to download the macro script. Make sure your Bioformats plugin is installed and up to date (5.7.2 recomended).
Volocity
Click here to view the Volocity User Guide
Fiji Imagej Download Windows 10
IMARIS
Click here to download the IMARIS Reference Guide.
Click here to visit the IMARIS Learning Center
Fiji Imagej Download
volocityuserguide.pdf | 7.78 MB |
image_analysis_guide_revised_01-2014.pdf | 946 KB |